CDS

Accession Number TCMCG066C25596
gbkey CDS
Protein Id XP_034598784.1
Location complement(join(35808752..35808991,35809105..35809231,35809330..35809446,35809516..35809672,35809788..35809929,35810034..35810124,35810256..35810362,35810548..35810703,35810826..35810996,35811103..35811244,35811335..35811454,35811569..35811688,35811808..35811861,35812092..35812213,35812312..35812408,35812591..35812604))
Gene LOC117859715
GeneID 117859715
Organism Setaria viridis

Protein

Length 658aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA633601
db_source XM_034742893.1
Definition probable rhamnogalacturonate lyase B [Setaria viridis]

EGGNOG-MAPPER Annotation

COG_category S
Description Rhamnogalacturonate lyase family
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko01000        [VIEW IN KEGG]
KEGG_ko ko:K18195        [VIEW IN KEGG]
EC 4.2.2.23        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
KEGG_Pathway -
GOs -

Sequence

CDS:  
ATGGGGAAGCTTAGCTGCAGGAGCCTCTGCTGCATGGGCCCTCCGTCGCCGGCCGGCGCCGGCGCCGTCGACGCCACCGACGGCGTCAGGGTCAAGGTCAGCAACCGATATGTTGAGATAAAAAATGGCATCTTTGAGCTGACGCTGTCCAACCCGGACGGGATCGTGACCGGCGTGCGCTACAATGGTGTGGATAATCTCATGGAGATCCTTAACAAGGAAGACAACAGAGGGTACTGGGACCTTGTTTGGAACCCACCAGGACAGAAAACCGGCATCTTTGATGTGATCAAAGGCACTGAGTTCCGCATCATATACCACGATGAAAACCAGGCTGAGGTCTCCTTCACCAGAAATTGGGATCCTTCCCTTGAAGGCAAAGCTGTCCCCTTGAACATCGATAAGAGGTTCATCGTTCTCCGGGGTTCTTCAGGATTCTACACCTATGGAATCTATGAGCATAAGGAAGGATGGCCTGACTTTGGCTTGGGAGAGACGAGGGTGGCTTTCAAGCTCCGGAAAGACAAGTTTCATTACATGGCATTGGCTGACAACAGGCAGAGAATTATGCCAATGCCCGATGACCGACTGCCTCCCCGAGGCCAGCCATTAGCATACCCTGAGGCCGTGCTCCTTGTGGACCCAATCAATCCTGATCTCAGAGGGGAGGTTGACGACAAGTACCAGTACTCTTGCGAGGACCAGTACAACAATGTCCATGGATGGATGTCATTCGATCCTCCCATCGGCTTCTGGCAGATCACTCCAAGTGATGAGTTCAGGACAGGAGGACCCCTGAAGCAGAATTTGACCTCTCATGTTGGCCCCACTACACTGGCTATGTTTCTTAGCGCACATTATGCGGGGGATGACCTTTCACCCGTGTTTACCAATGGAGAATACTGGAAAAAGGTCCATGGACCGGTATTCATGTACCTTAATTCCAGTTGGGACGGAAGTGACCCAACTATGCTCTGGGAGGACGCAAAAGTTCAGATGATGATTGAGAAAGAAAGCTGGCCATATAGTTTCGCACTTTCAGAGGATTTTCAGAAGACTGAGCAAAGAGGTTGCATCTCTGGTAGATTACTAGTTCGAGACAGGTATATAGATGATGAGGACCTTTATGCCTCCGGAGCCTATGTAGGCTTGGCCCTACCAGGAGAAGTTGGATCCTGGCAAAGAGAGTGCAAGGGATACCAATTCTGGTGTAGAGCAGACGTAGATGGGAGCTTCTACATAAGGAGCATTGTAACTGGGAACTACAACCTGTATGCATGGGTTCCCGGTTTCATAGGGGACTACAGATTAGATGCTACACTGACCATAGCTTCAGGGGATGATATTTATCTGGGTGACCTTGTGTATGAACCACCAAGAGACGGTCCGACGATGTGGGAGATTGGAGTACCTGATCGATCCGCCGCTGAGTTCTATGTCCCAGACCCTAACCCCAACTATATCAATAGACTGTACATCAACCACCCTGACAGGTTTAGGCAATACGGACTTTGGGAACGATATGCAGAACTATACCCAGACAGTGATCTGGTGTACACAATCGGCCAGAGCGACTATAGCACCGATTGGTTCTATGCTCAAGTTAACAGAAAAGTTGATGACAACACTTACCAACCAACTACATGGCAAATCAAGTTCACTCTTGACAGTGTGAGTCCAGGCAGCACCTATAAGTTCCGAGTGGCGCTTGCGTCTTCGGCACGCGCTGAGTTGCAGGTTTTCTTTAACGATCAGAACAGGGGTGTTCCTCACTTCGCCACCGGGCTGATCGGCAGGGACAACGCCATAGCAAGACATGGGATCCATGGGCTATACTGGCTGTTCAACATCAATGTGGATAGTGCCTGGCTTGTCCAAGGGATGAACACAATCTACCTGAAGCAGCCCAGGAACCAGAGCCCATTTCAGGGGCTGATGTATGACTACTTGCGTTTAGAGGGACCGTGTGGCTGCTAA
Protein:  
MGKLSCRSLCCMGPPSPAGAGAVDATDGVRVKVSNRYVEIKNGIFELTLSNPDGIVTGVRYNGVDNLMEILNKEDNRGYWDLVWNPPGQKTGIFDVIKGTEFRIIYHDENQAEVSFTRNWDPSLEGKAVPLNIDKRFIVLRGSSGFYTYGIYEHKEGWPDFGLGETRVAFKLRKDKFHYMALADNRQRIMPMPDDRLPPRGQPLAYPEAVLLVDPINPDLRGEVDDKYQYSCEDQYNNVHGWMSFDPPIGFWQITPSDEFRTGGPLKQNLTSHVGPTTLAMFLSAHYAGDDLSPVFTNGEYWKKVHGPVFMYLNSSWDGSDPTMLWEDAKVQMMIEKESWPYSFALSEDFQKTEQRGCISGRLLVRDRYIDDEDLYASGAYVGLALPGEVGSWQRECKGYQFWCRADVDGSFYIRSIVTGNYNLYAWVPGFIGDYRLDATLTIASGDDIYLGDLVYEPPRDGPTMWEIGVPDRSAAEFYVPDPNPNYINRLYINHPDRFRQYGLWERYAELYPDSDLVYTIGQSDYSTDWFYAQVNRKVDDNTYQPTTWQIKFTLDSVSPGSTYKFRVALASSARAELQVFFNDQNRGVPHFATGLIGRDNAIARHGIHGLYWLFNINVDSAWLVQGMNTIYLKQPRNQSPFQGLMYDYLRLEGPCGC